> ## Documentation Index
> Fetch the complete documentation index at: https://proto.evodesign.org/docs/llms.txt
> Use this file to discover all available pages before exploring further.

# University of California, San Francisco

![University of California, San Francisco](https://mintcdn.com/bio-pro/rW-ZVHoYhZw2v7T_/assets/images/cached/5041e72f92fb.png?fit=max\&auto=format\&n=rW-ZVHoYhZw2v7T_\&q=85\&s=7ac60809f069a1cfd150f24d073683ca)

[[https://www.ucsf.edu/](https://www.ucsf.edu/)](https://www.ucsf.edu/)

Proto is not affiliated with University of California, San Francisco. This page lists models and codebases developed by University of California, San Francisco that are available through the Proto tools library. Product names, logos, and trademarks are the property of their respective owners.

![](https://proto-bio.github.io/proto-assets/images/tool/codonfm/carousel.png)

![](https://mintcdn.com/bio-pro/HNsZvj6f9nz_ewfp/assets/images/cached/e6d687cf4821.png?fit=max\&auto=format\&n=HNsZvj6f9nz_ewfp\&q=85\&s=e0609b9aba9a1d5e08532b56b495692f) NVIDIA ![](https://mintcdn.com/bio-pro/_UGa2jUMKeVPCbLk/assets/images/cached/2f286ca379a2.png?fit=max\&auto=format\&n=_UGa2jUMKeVPCbLk\&q=85\&s=8dfa2f559c96e84c86ef4d3df3cb39d7) Arc Institute ![](https://mintcdn.com/bio-pro/rW-ZVHoYhZw2v7T_/assets/images/cached/5041e72f92fb.png?fit=max\&auto=format\&n=rW-ZVHoYhZw2v7T_\&q=85\&s=7ac60809f069a1cfd150f24d073683ca) UCSF

[Open](https://proto.evodesign.org/docs/tools/masked-models/codonfm.md)

![](https://proto-bio.github.io/proto-assets/images/tool/parade/carousel.png)

![](https://mintcdn.com/bio-pro/rW-ZVHoYhZw2v7T_/assets/images/cached/5041e72f92fb.png?fit=max\&auto=format\&n=rW-ZVHoYhZw2v7T_\&q=85\&s=7ac60809f069a1cfd150f24d073683ca) UCSF ![](https://mintcdn.com/bio-pro/rW-ZVHoYhZw2v7T_/assets/images/cached/e44bca269463.png?fit=max\&auto=format\&n=rW-ZVHoYhZw2v7T_\&q=85\&s=87db0e2162a4f2d6c226b794824d9a29) Autosome.org

[Open](https://proto.evodesign.org/docs/tools/sequence-scoring/parade.md)


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